MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Parabacteroides goldsteinii
19428wG3_P14
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 123
bases: 6,785,295 bps
CDS: 5,393
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 70
misc RNA:
Total features: 5,473
Total number of protein coding genes annotated/found:
5,393
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5019|JADGKT010000001.1
SEQF5019_01888
Genome Viewer
NA
AA
543/181
643448-642906
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01887
Genome Viewer
NA
AA
1014/338
642877-641864
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01886
Genome Viewer
NA
AA
108/36
641833-641726
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01885
Genome Viewer
NA
AA
450/150
641659-641210
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01884
Genome Viewer
NA
AA
858/286
640946-640089
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01883
Genome Viewer
NA
AA
345/115
640016-639672
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01882
Genome Viewer
NA
AA
900/300
639667-638768
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01881
Genome Viewer
NA
AA
591/197
638749-638159
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01880
Genome Viewer
NA
AA
462/154
638132-637671
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01879
Genome Viewer
NA
AA
912/304
637518-636607
Protease HtpX
SEQF5019|JADGKT010000001.1
SEQF5019_01878
Genome Viewer
NA
AA
462/154
636124-636585
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01877
Genome Viewer
NA
AA
240/80
635523-635762
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01876
Genome Viewer
NA
AA
225/75
635175-635399
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01875
Genome Viewer
NA
AA
1902/634
633192-635093
Nucleoid occlusion protein
SEQF5019|JADGKT010000001.1
SEQF5019_01874
Genome Viewer
NA
AA
591/197
632575-633165
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01873
Genome Viewer
NA
AA
1017/339
631492-632508
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01872
Genome Viewer
NA
AA
294/98
631166-631459
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01871
Genome Viewer
NA
AA
117/39
630753-630637
hypothetical protein
SEQF5019|JADGKT010000001.1
SEQF5019_01870
Genome Viewer
NA
AA
1770/590
630640-628871
HTH-type transcriptional activator RhaS
SEQF5019|JADGKT010000001.1
SEQF5019_01869
Genome Viewer
NA
AA
312/104
628706-628395
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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